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Create a shiny app that does what the fragman program does

I generate data that has a series of peaks, representing fragments of DNA, in 5 coloured channels. The raw output has time on the x axis and peak height (in rfu, or relative fluorescence units) on the y axis

One channel contains a reference (known as a ladder). This has DNA fragments of known size. Using this reference, you can convert the x-axis from time to base pair units.

I currently use the fragman program to 'call' the ladder peaks. Sometimes some peaks are missing (because of bleed through from other channels), so often you need to manually correct the ladder calls.

I'd like to create a shiny-based web app to do what fragman does. It needs to display the data from one file at a time, display the calls it automatically assigns, and allow the user to remove bad calls (e.g. by right click) and add correct calls (e.g. by left click).

I will then integrate this into my analysis pipeline, which will also be shiny app based.

I've written a manual script that does what I want it to, which can be used as a reference. However, I need help making this shiny compatible.

Shiny app version of fragman

Kĩ năng: Ngôn ngữ lập trình R, Khoa học dữ liệu, Data Analytics

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Về Bên Thuê:
( 0 nhận xét ) Constanța, Romania

ID dự án: #31632647

3 freelancer chào giá trung bình$203 cho công việc này

TheLKteam

Dear Prospective Client, I've been developing advanced shiny apps for several years and would like to work on your project. Check out my app MetricGate on google. I assure you that you will be impressed by the qualit Thêm

$300 USD trong 7 ngày
(7 Nhận xét)
4.7
OSolovyev

Hello, I can build you R Shiny App. I am Top rated Freelancer. Have been working with R as a Data Scientist in Banking for 10+ years. Developed Dashboards, Forecasts and Scoring models for Marketing and Sales. Earn Thêm

$140 USD trong 7 ngày
(0 Nhận xét)
0.0
Bidossessih

Dear Client, I have considerable experience with R programming and interactive R shiny application design. I have a background in molecular biology and I undertand very clearly what result you need with your applicatio Thêm

$170 USD trong 7 ngày
(0 Nhận xét)
0.0